My understanding is that any aftermarket part/s installed on your vehicle that is/are not OEM part/s will not be covered under your factory warrenty. If the dealer can prove that the replacement parts you install cause other parts on the vehicle to fail, then everything associated with the faillure will not be covered by the warrently.When you had your TrueTrac installed were you told that it would void your warranty? We would like one installed on our 2019 T350 but the differential shop we spoke with said they wouldn't do it because it would void the warranty.
It is a very low probability that a LSD differential will cause any other part failures on the van, (unless you are doing something abusive to the van outside its operational design envelope.) Since Ford offers their clucth plate version of LSD as an option, installing a Truetrac is a more durable and robust solution than the OEM LSD.
Installing a "Locker" or "E-Locker" has a higher probability of stressing parts on the van then a LSD. Primarily because this mean the driver might take the van off-road on road conditions that the van was not designed for.